BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012B06SP1|AL426320
(718 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1752 1417 0.0
>3x_Contig1752
Length = 22471
Score = 1417 bits (713), Expect = 0.0
Identities = 715/717 (99%)
Strand = Plus / Plus
Query: 2 ctcaccgagcaatggttccgtggtcgtacttcagcatctatcgagctgctgattggtaaa 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1732 ctcaccgagcaatggttccgtggtcgtacttcagcatctatcgagctgctgattggtaaa 1791
Query: 62 ggtgaccgacgtcgtagttgctcctttttcactacatcttgaagagacatcaccctttgc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1792 ggtgaccgacgtcgtagttgctcctttttcactacatcttgaagagacatcaccctttgc 1851
Query: 122 gataattgtttattggctagtttcaataatcctaggcatgtcattagccgcttcttcgat 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1852 gataattgtttattggctagtttcaataatcctaggcatgtcattagccgcttcttcgat 1911
Query: 182 tcgattgamatattcaactgatattccttcaagttttccttaatccgtctccgtttcgat 241
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1912 tcgattgacatattcaactgatattccttcaagttttccttaatccgtctccgtttcgat 1971
Query: 242 ccacgttcttttcccgtaacacaaatctctttcccttggaccttaatatgttctatatcc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1972 ccacgttcttttcccgtaacacaaatctctttcccttggaccttaatatgttctatatcc 2031
Query: 302 aaaccatgaacacaagcatcatcgctgtcatcatcatcgccgttgctttgtgtatccacc 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2032 aaaccatgaacacaagcatcatcgctgtcatcatcatcgccgttgctttgtgtatccacc 2091
Query: 362 tcatctatctttcttttcgcagcgccgatccatatcccagaagttttttcgatcttcttc 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2092 tcatctatctttcttttcgcagcgccgatccatatcccagaagttttttcgatcttcttc 2151
Query: 422 accagccggtccgcccttctgattaattttggatggttcgtacgtgtctgctcatataaa 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2152 accagccggtccgcccttctgattaattttggatggttcgtacgtgtctgctcatataaa 2211
Query: 482 tmaacggcactctgcttcatcttatctagtagtctctcacttttaccactgctctcgctg 541
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2212 tcaacggcactctgcttcatcttatctagtagtctctcacttttaccactgctctcgctg 2271
Query: 542 ccactcggtgtaacactgtaatcaccgtttcgcagcttatccaaagcctcgacagctatc 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2272 ccactcggtgtaacactgtaatcaccgtttcgcagcttatccaaagcctcgacagctatc 2331
Query: 602 tcttctgagtctttactcacagtaaacttaatagtagactggttacctctatcctcagac 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2332 tcttctgagtctttactcacagtaaacttaatagtagactggttacctctatcctcagac 2391
Query: 662 attttccgtaccgttgaattttatctttccttgccttattcgagggtgagtcagcga 718
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2392 attttccgtaccgttgaattttatctttccttgccttattcgagggtgagtcagcga 2448
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4752
Number of Sequences: 1807
Number of extensions: 4752
Number of successful extensions: 78
Number of sequences better than 1.0e-20: 1
length of query: 718
length of database: 10,358,551
effective HSP length: 16
effective length of query: 702
effective length of database: 10,329,639
effective search space: 7251406578
effective search space used: 7251406578
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)